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lmtr-5 Late endosomal/lysosomal adaptor and MAPK and MTOR activator 5 [ Caenorhabditis elegans ]

Gene ID: 187904, updated on 9-Dec-2024

Summary

Official Symbol
lmtr-5
Official Full Name
Late endosomal/lysosomal adaptor and MAPK and MTOR activator 5
Primary source
WormBase:WBGene00020101
Locus tag
CELE_R148.2
See related
AllianceGenome:WB:WBGene00020101
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to contribute to guanyl-nucleotide exchange factor activity. Predicted to be involved in cellular response to amino acid stimulus and positive regulation of TORC1 signaling. Predicted to be located in cytoplasm. Predicted to be part of Ragulator complex. Predicted to be active in lysosome. Orthologous to human LAMTOR5 (late endosomal/lysosomal adaptor, MAPK and MTOR activator 5). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See lmtr-5 in Genome Data Viewer
Location:
chromosome: III
Exon count:
3
Sequence:
Chromosome: III; NC_003281.10 (3183677..3185241)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene MARVEL domain-containing protein Neighboring gene DUF2846 domain-containing protein;DUF4476 domain-containing protein Neighboring gene MecKel-Gruber Syndrome (MKS) homolog Neighboring gene tRNA Neighboring gene tRNA

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
contributes_to guanyl-nucleotide exchange factor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in cellular response to amino acid stimulus IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of TORC1 signaling IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
part_of Ragulator complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of Ragulator complex IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
is_active_in lysosome IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Late endosomal/lysosomal adaptor and MAPK and MTOR activator 5
NP_497668.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    3183677..3185241
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_065267.4NP_497668.2  Late endosomal/lysosomal adaptor and MAPK and MTOR activator 5 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_497668.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O17268
    Conserved Domains (1) summary
    pfam16672
    Location:192
    LAMTOR5; Ragulator complex protein LAMTOR5