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R09E10.5 Uncharacterized protein [ Caenorhabditis elegans ]

Gene ID: 187743, updated on 4-Jan-2025

Summary

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Official Symbol
R09E10.5
Official Full Name
Uncharacterized protein
Primary source
WormBase:WBGene00011175
Locus tag
CELE_R09E10.5
See related
AllianceGenome:WB:WBGene00011175
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in cell-matrix adhesion. Predicted to be located in membrane. Predicted to be active in extracellular space. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See R09E10.5 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
14
Sequence:
Chromosome: IV; NC_003282.8 (10295431..10302303, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene SWIM-type domain-containing protein Neighboring gene PH domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Saposin B-type domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Uncharacterized protein
NP_501890.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    10295431..10302303 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069489.4 → NP_501890.2  Uncharacterized protein CELE_R09E10.5 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_501890.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q21874
    Conserved Domains (2) summary
    smart00723
    Location:648 → 829
    AMOP; Adhesion-associated domain present in MUC4 and other proteins
    smart00539
    Location:194 → 358
    NIDO; Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q21874.2

Gene LinkOut

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