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K06G5.3 AT hook, DNA-binding motif-containing protein [ Caenorhabditis elegans ]

Gene ID: 187069, updated on 9-Dec-2024

Summary

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Official Symbol
K06G5.3
Official Full Name
AT hook, DNA-binding motif-containing protein
Primary source
WormBase:WBGene00010607
Locus tag
CELE_K06G5.3
See related
AllianceGenome:WB:WBGene00010607
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable DNA binding activity. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See K06G5.3 in Genome Data Viewer
Location:
chromosome: X
Exon count:
16
Sequence:
Chromosome: X; NC_003284.9 (14219568..14223256, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene VWFA domain-containing protein Neighboring gene ncRNA Neighboring gene Cytochrome P450 Neighboring gene tRNA-Trp

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
AT hook, DNA-binding motif-containing protein
NP_001362106.1
  • Partially confirmed by transcript evidence
NP_001362107.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    14219568..14223256 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001375166.1 → NP_001362107.1  AT hook, DNA-binding motif-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5E4LXS9
    Conserved Domains (1) summary
    COG5271
    Location:66 → 259
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

  2. NM_001375167.1 → NP_001362106.1  AT hook, DNA-binding motif-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5E4LWE3
    Conserved Domains (1) summary
    COG5271
    Location:66 → 259
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
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