U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

F57G12.2 C2H2-type domain-containing protein;Spt4 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 186478, updated on 9-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
F57G12.2
Official Full Name
C2H2-type domain-containing protein;Spt4 domain-containing protein
Primary source
WormBase:WBGene00010222
Locus tag
CELE_F57G12.2
See related
AllianceGenome:WB:WBGene00010222
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See F57G12.2 in Genome Data Viewer
Location:
chromosome: X
Exon count:
8
Sequence:
Chromosome: X; NC_003284.9 (12156307..12160052, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene pyrroline-5-carboxylate reductase Neighboring gene C2HC/C3H-type domain-containing protein Neighboring gene UNC93-like protein MFSD11 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
C2H2-type domain-containing protein;Spt4 domain-containing protein
NP_001257185.1
  • Confirmed by transcript evidence
NP_001257186.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    12156307..12160052 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001270256.3 → NP_001257185.1  C2H2-type domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001257185.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EEW2

  2. NM_001270257.2 → NP_001257186.1  Spt4 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001257186.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20956
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools