U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

F53H2.1 Protein containing ALS2cr12 (ALS2CR12) signature;SH2 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 186191, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
F53H2.1
Official Full Name
Protein containing ALS2cr12 (ALS2CR12) signature;SH2 domain-containing protein
Primary source
WormBase:WBGene00010004
Locus tag
CELE_F53H2.1
See related
AllianceGenome:WB:WBGene00010004
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See F53H2.1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
22
Sequence:
Chromosome: V; NC_003283.11 (20387715..20393367)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Phosphatidate cytidylyltransferase Neighboring gene ncRNA Neighboring gene Cilia- and flagella-associated protein 251-like Neighboring gene CaeNaCin (Caenorhabditis bacteriocin) Neighboring gene ncRNA Neighboring gene WW domain-containing protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Markers

Homology

General protein information

Go to the top of the page Help
Preferred Names
Protein containing ALS2cr12 (ALS2CR12) signature;SH2 domain-containing protein
NP_001300117.1
  • Partially confirmed by transcript evidence
NP_001300118.1
  • Partially confirmed by transcript evidence
NP_507929.2
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    20387715..20393367
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_075528.2 → NP_507929.2  SH2 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_507929.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9U3E6
    Conserved Domains (1) summary
    pfam05218
    Location:734 → 920
    DUF713; Protein of unknown function (DUF713)

  2. NM_001313188.1 → NP_001300117.1  Protein containing ALS2cr12 (ALS2CR12) signature [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AS53
    Conserved Domains (1) summary
    pfam05218
    Location:556 → 742
    DUF713; Protein of unknown function (DUF713)

  3. NM_001313189.1 → NP_001300118.1  Protein containing ALS2cr12 (ALS2CR12) signature [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AVM5
    Conserved Domains (1) summary
    pfam05218
    Location:149 → 335
    DUF713; Protein of unknown function (DUF713)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools