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F53F1.3 NADP-dependent oxidoreductase domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 186169, updated on 2-Nov-2024

Summary

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Official Symbol
F53F1.3
Official Full Name
NADP-dependent oxidoreductase domain-containing protein
Primary source
WormBase:WBGene00009981
Locus tag
CELE_F53F1.3
See related
AllianceGenome:WB:WBGene00009981
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable aldose reductase (NADPH) activity. Predicted to be active in cytosol. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F53F1.3 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (13408242..13409832)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ZP domain-containing protein Neighboring gene ncRNA Neighboring gene NADP-dependent oxidoreductase domain-containing protein Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables aldose reductase (NADPH) activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
NADP-dependent oxidoreductase domain-containing protein
NP_506323.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    13408242..13409832
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_073922.5 → NP_506323.1  NADP-dependent oxidoreductase domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_506323.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    P91998
    Conserved Domains (1) summary
    cd19071
    Location:12 → 265
    AKR_AKR1-5-like; AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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