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F38C2.7 C3H1-type domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 185463, updated on 4-Jan-2025

Summary

Official Symbol
F38C2.7
Official Full Name
C3H1-type domain-containing protein
Primary source
WormBase:WBGene00009539
Locus tag
CELE_F38C2.7
See related
AllianceGenome:WB:WBGene00009539
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable mRNA 3'-UTR binding activity. Predicted to be active in cytosol. Is expressed widely. Orthologous to human ZFP36 (ZFP36 ring finger protein); ZFP36L1 (ZFP36 ring finger protein like 1); and ZFP36L2 (ZFP36 ring finger protein like 2). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

See F38C2.7 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_003282.8 (16276780..16277391, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
C3H1-type domain-containing protein
NP_502930.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    16276780..16277391 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_070529.3NP_502930.1  C3H1-type domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502930.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O45493
    Conserved Domains (1) summary
    pfam00642
    Location:130154
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)