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sre-6 Serpentine receptor class epsilon-6 [ Caenorhabditis elegans ]

Gene ID: 185100, updated on 4-Jan-2025

Summary

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Official Symbol
sre-6
Official Full Name
Serpentine receptor class epsilon-6
Primary source
WormBase:WBGene00009242
Locus tag
CELE_F28H7.9
See related
AllianceGenome:WB:WBGene00009242
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Is expressed in intestine and nervous system. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See sre-6 in Genome Data Viewer
Location:
chromosome: V
Exon count:
8
Sequence:
Chromosome: V; NC_003283.11 (10760575..10762795, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Glycosyltransferase family 92 protein Neighboring gene Receptor L-domain domain-containing protein Neighboring gene CRAL-TRIO domain-containing protein F28H7.8 Neighboring gene ANK_REP_REGION domain-containing protein;Ion transport domain-containing protein Neighboring gene ncRNA Neighboring gene PNPLA domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in sensory perception of chemical stimulus IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine receptor class epsilon-6
NP_505747.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    10760575..10762795 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_073346.3 → NP_505747.2  Serpentine receptor class epsilon-6 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_505747.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q19897
    Conserved Domains (1) summary
    pfam03125
    Location:47 → 337
    Sre; C. elegans Sre G protein-coupled chemoreceptor
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q19897.2

Gene LinkOut

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