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sri-5 Serpentine Receptor, class H;Serpentine Receptor, class T [ Caenorhabditis elegans ]

Gene ID: 185064, updated on 4-Jan-2025

Summary

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Official Symbol
sri-5
Official Full Name
Serpentine Receptor, class H;Serpentine Receptor, class T
Primary source
WormBase:WBGene00005517
Locus tag
CELE_F28D9.2
See related
AllianceGenome:WB:WBGene00005517
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in detection of chemical stimulus involved in sensory perception. Predicted to be located in membrane. Is expressed in egg-laying apparatus; neurons; pharynx; and ventral nerve cord. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See sri-5 in Genome Data Viewer
Location:
chromosome: I
Exon count:
8
Sequence:
Chromosome: I; NC_003279.8 (11182795..11186206)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Transmembrane protein 242 Neighboring gene ncRNA Neighboring gene PWI domain-containing protein Neighboring gene ncRNA Neighboring gene Zinc finger protein ztf-6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in detection of chemical stimulus involved in sensory perception IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine Receptor, class H;Serpentine Receptor, class T
NP_001021424.1
  • Confirmed by transcript evidence
NP_001021425.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    11182795..11186206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001026253.3 → NP_001021424.1  Serpentine Receptor, class T [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021424.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7YZP5
    Conserved Domains (1) summary
    pfam10327
    Location:8 → 308
    7TM_GPCR_Sri; Serpentine type 7TM GPCR chemoreceptor Sri

  2. NM_001026254.4 → NP_001021425.1  Serpentine Receptor, class H [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021425.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O62186
    Conserved Domains (1) summary
    cl11665
    Location:8 → 283
    7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh
Nucleotide Protein
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