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F20G2.1 DeHydrogenases, Short chain [ Caenorhabditis elegans ]

Gene ID: 184742, updated on 4-Jan-2025

Summary

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Official Symbol
F20G2.1
Official Full Name
DeHydrogenases, Short chain
Primary source
WormBase:WBGene00008985
Locus tag
CELE_F20G2.1
See related
AllianceGenome:WB:WBGene00008985
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable oxidoreductase activity. Predicted to be active in cytoplasm. Orthologous to human CBR1 (carbonyl reductase 1) and CBR3 (carbonyl reductase 3). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See F20G2.1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
5
Sequence:
Chromosome: V; NC_003283.11 (13752264..13753581, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene CUB-like domain-containing protein Neighboring gene CUB-like domain-containing protein;CUB_2 domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene DeHydrogenases, Short chain

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables oxidoreductase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
DeHydrogenases, Short chain
NP_506406.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    13752264..13753581 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_074005.3 → NP_506406.1  DeHydrogenases, Short chain [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_506406.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q93544
    Conserved Domains (2) summary
    cd05325
    Location:6 → 248
    carb_red_sniffer_like_SDR_c; carbonyl reductase sniffer-like, classical (c) SDRs
    pfam00106
    Location:4 → 208
    adh_short; short chain dehydrogenase
Nucleotide Protein
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