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plp-2 DUF3467 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 184719, updated on 9-Dec-2024

Summary

Official Symbol
plp-2
Official Full Name
DUF3467 domain-containing protein
Primary source
WormBase:WBGene00008976
Locus tag
CELE_F20D1.4
See related
AllianceGenome:WB:WBGene00008976
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II transcription regulatory region sequence-specific DNA binding activity; and purine-rich negative regulatory element binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human PURB (purine rich element binding protein B) and PURG (purine rich element binding protein G). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See plp-2 in Genome Data Viewer
Location:
chromosome: X
Exon count:
2
Sequence:
Chromosome: X; NC_003284.9 (14982140..14982804, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Essential MCU regulator, mitochondrial Neighboring gene pseudo Neighboring gene Rab3 GTPase-activating protein catalytic subunit Neighboring gene Ig-like domain-containing protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
DUF3467 domain-containing protein
NP_510489.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    14982140..14982804 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_078088.3NP_510489.1  DUF3467 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_510489.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q93537
    Conserved Domains (1) summary
    smart00712
    Location:100171
    PUR; DNA/RNA-binding repeats in PUR-alpha/beta/gamma and in hypothetical proteins from spirochetes and the Bacteroides-Cytophaga-Flexibacter bacteria