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F19C6.3 VWFC domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 184675, updated on 9-Dec-2024

Summary

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Official Symbol
F19C6.3
Official Full Name
VWFC domain-containing protein
Primary source
WormBase:WBGene00008952
Locus tag
CELE_F19C6.3
See related
AllianceGenome:WB:WBGene00008952
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable calcium ion binding activity. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See F19C6.3 in Genome Data Viewer
Location:
chromosome: X
Exon count:
10
Sequence:
Chromosome: X; NC_003284.9 (10005304..10008764, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor kinase 1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene Peptidase_M13 domain-containing protein;Peptidase_M13_N domain-containing protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
VWFC domain-containing protein
NP_509679.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    10005304..10008764 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_077278.4 → NP_509679.1  VWFC domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_509679.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q09538
    Conserved Domains (3) summary
    smart00179
    Location:377 → 416
    EGF_CA; Calcium-binding EGF-like domain
    smart00214
    Location:216 → 270
    VWC; von Willebrand factor (vWF) type C domain
    pfam12947
    Location:346 → 375
    EGF_3; EGF domain
Nucleotide Protein
Heading Accession and Version

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