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F16H6.4 DRBM domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 184591, updated on 4-Jan-2025

Summary

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Official Symbol
F16H6.4
Official Full Name
DRBM domain-containing protein
Primary source
WormBase:WBGene00008894
Locus tag
CELE_F16H6.4
See related
AllianceGenome:WB:WBGene00008894
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable cysteine-type peptidase activity. Predicted to be involved in proteolysis. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See F16H6.4 in Genome Data Viewer
Location:
chromosome: V
Exon count:
12
Sequence:
Chromosome: V; NC_003283.11 (18198721..18205815)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Deleted in malignant brain tumors 1 protein-like Neighboring gene ShKT domain-containing protein Neighboring gene ncRNA Neighboring gene ABC transporter Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables cysteine-type peptidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
DRBM domain-containing protein
NP_001300081.1
  • Confirmed by transcript evidence
NP_001300082.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    18198721..18205815
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001313153.2 → NP_001300082.1  DRBM domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3ARY7
    Conserved Domains (1) summary
    pfam06162
    Location:13 → 179
    PgaPase_1; Putative pyroglutamyl peptidase PgaPase_1

  2. NM_001313152.2 → NP_001300081.1  DRBM domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AUT5
    Conserved Domains (1) summary
    pfam06162
    Location:13 → 179
    PgaPase_1; Putative pyroglutamyl peptidase PgaPase_1
Nucleotide Protein
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