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LOC18432363 60S ribosomal protein L44 [ Amborella trichopoda ]

Gene ID: 18432363, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18432363
Gene description
60S ribosomal protein L44
Locus tag
AMTR_s00077p00123980
Gene type
protein coding
RefSeq status
MODEL
Organism
Amborella trichopoda
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella
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Genomic context

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See LOC18432363 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current AMTR1.0 (GCF_000471905.2) Unplaced Scaffold NW_006498122.1 (1660358..1666999, complement)

NW_006498122.1Genomic Context describing neighboring genes Neighboring gene uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic Neighboring gene uncharacterized LOC18432362 Neighboring gene nuclear-pore anchor Neighboring gene protein NETWORKED 4A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006498122.1 Unplaced Scaffold Reference AMTR1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Amborella trichopoda Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AMTR1.0 Primary Assembly

Genomic

  1. NW_006498122.1 Reference AMTR1.0 Primary Assembly

    Range
    1660358..1666999 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011624372.2 → XP_011622674.1  60S ribosomal protein L44

    See identical proteins and their annotated locations for XP_011622674.1

    UniProtKB/TrEMBL
    W1PZK9
    Conserved Domains (1) summary
    PTZ00157
    Location:1 → 86
    PTZ00157; 60S ribosomal protein L36a; Provisional

  2. XM_020666141.1 → XP_020521800.1  60S ribosomal protein L44

    UniProtKB/TrEMBL
    W1PZK9
    Conserved Domains (1) summary
    PTZ00157
    Location:1 → 86
    PTZ00157; 60S ribosomal protein L36a; Provisional
Nucleotide Protein
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