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fbxa-88 F-box domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 184273, updated on 17-Oct-2024

Summary

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Official Symbol
fbxa-88
Official Full Name
F-box domain-containing protein
Primary source
WormBase:WBGene00008632
Locus tag
CELE_F10A3.2
See related
AllianceGenome:WB:WBGene00008632
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See fbxa-88 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (16142008..16143116, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Transmembrane protein Neighboring gene CLaudin-like in Caenorhabditis Neighboring gene F-box domain-containing protein Neighboring gene ncRNA Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The F-box protein family. Kipreos ET, et al. Genome Biol, 2000. PMID 11178263, Free PMC Article
  2. Screening for cold tolerance genes in C. elegans, whose expressions are affected by anticancer drugs camptothecin and leptomycin B. Okahata M, et al. Sci Rep, 2024 Mar 5. PMID 38443452, Free PMC Article
  3. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  4. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
F-box domain-containing protein
NP_507065.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    16142008..16143116 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_074664.5 → NP_507065.2  F-box domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_507065.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O45335
    Conserved Domains (2) summary
    smart00256
    Location:17 → 56
    FBOX; A Receptor for Ubiquitination Targets
    pfam01827
    Location:140 → 278
    FTH; FTH domain
Nucleotide Protein
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