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D2007.2 MSP domain-containing protein;Major sperm protein [ Caenorhabditis elegans ]

Gene ID: 183938, updated on 4-Jan-2025

Summary

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Official Symbol
D2007.2
Official Full Name
MSP domain-containing protein;Major sperm protein
Primary source
WormBase:WBGene00017042
Locus tag
CELE_D2007.2
See related
AllianceGenome:WB:WBGene00017042
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in cytoskeleton. Is expressed in body wall musculature; head; intestine; and nervous system. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See D2007.2 in Genome Data Viewer
Location:
chromosome: III
Exon count:
6
Sequence:
Chromosome: III; NC_003281.10 (8148963..8154628)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Large ribosomal subunit protein uL18m Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene Autophagy-related protein 13 homolog Neighboring gene Inositol polyphosphate 5-phosphatase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
MSP domain-containing protein;Major sperm protein
NP_001317873.1
  • Confirmed by transcript evidence
NP_001317874.1
  • Confirmed by transcript evidence
NP_001317875.1
  • Confirmed by transcript evidence
NP_001367503.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    8148963..8154628
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001379822.2 → NP_001367503.1  Major sperm protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34376
    Conserved Domains (1) summary
    pfam00635
    Location:77 → 175
    Motile_Sperm; MSP (Major sperm protein) domain

  2. NM_001330932.3 → NP_001317873.1  Major sperm protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1C3NSP3

  3. NM_001330933.3 → NP_001317874.1  Major sperm protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1C3NSI2

  4. NM_001330934.1 → NP_001317875.1  MSP domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1C3NSM2
    Conserved Domains (1) summary
    cl27657
    Location:1 → 60
    Motile_Sperm; MSP (Major sperm protein) domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P34376.1

Gene LinkOut

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