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srbc-20 Serpentine Receptor, class BC (Class B-like) [ Caenorhabditis elegans ]

Gene ID: 183492, updated on 4-Jan-2025

Summary

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Official Symbol
srbc-20
Official Full Name
Serpentine Receptor, class BC (Class B-like)
Primary source
WormBase:WBGene00016693
Locus tag
CELE_C45H4.11
See related
AllianceGenome:WB:WBGene00016693
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See srbc-20 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (2147095..2148626)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Seven TM Receptor Neighboring gene 7TM_GPCR_Srx domain-containing protein Neighboring gene FIP (Fungus-Induced Protein) Related Neighboring gene tRNA Neighboring gene Uncharacterized protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Deciphering complex genome rearrangements in C. elegans using short-read whole genome sequencing. Maroilley T, et al. Sci Rep, 2021 Sep 14. PMID 34521941, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine Receptor, class BC (Class B-like)
NP_001300062.1
  • Confirmed by transcript evidence
NP_001300063.1
  • Confirmed by transcript evidence
NP_503580.2
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    2147095..2148626
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071179.4 → NP_503580.2  Serpentine Receptor, class BC (Class B-like) [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503580.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O44692
    Conserved Domains (1) summary
    pfam10316
    Location:1 → 270
    7TM_GPCR_Srbc; Serpentine type 7TM GPCR chemoreceptor Srbc

  2. NM_001313133.3 → NP_001300062.1  Serpentine Receptor, class BC (Class B-like) [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3ARW0
    Conserved Domains (1) summary
    pfam10316
    Location:1 → 234
    7TM_GPCR_Srbc; Serpentine type 7TM GPCR chemoreceptor Srbc

  3. NM_001313134.3 → NP_001300063.1  Serpentine Receptor, class BC (Class B-like) [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0K3AVE3
    Conserved Domains (1) summary
    pfam10316
    Location:1 → 96
    7TM_GPCR_Srbc; Serpentine type 7TM GPCR chemoreceptor Srbc

RNA

  1. NR_132529.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

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