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C45E5.1 Glycerol-3-phosphate phosphatase [ Caenorhabditis elegans ]

Gene ID: 183469, updated on 9-Dec-2024

Summary

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Official Symbol
C45E5.1
Official Full Name
Glycerol-3-phosphate phosphatase
Primary source
WormBase:WBGene00016664
Locus tag
CELE_C45E5.1
See related
AllianceGenome:WB:WBGene00016664
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable phosphatase activity. Predicted to be active in cytoplasm. Orthologous to human PGP (phosphoglycolate phosphatase) and PDXP (pyridoxal phosphatase). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See C45E5.1 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
4
Sequence:
Chromosome: IV; NC_003282.8 (5744403..5747110)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene GH18 domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Nuclear Hormone Receptor family Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Glycerol-3-phosphate phosphatase
NP_500857.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    5744403..5747110
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_068456.7 → NP_500857.2  Glycerol-3-phosphate phosphatase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_500857.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q18645
    Conserved Domains (3) summary
    TIGR01460
    Location:18 → 274
    HAD-SF-IIA; Haloacid Dehalogenase Superfamily Class (subfamily) IIA
    pfam13242
    Location:221 → 284
    Hydrolase_like; HAD-hyrolase-like
    pfam13344
    Location:18 → 121
    Hydrolase_6; Haloacid dehalogenase-like hydrolase
Nucleotide Protein
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