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srlf-3 SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 182978, updated on 9-Dec-2024

Summary

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Official Symbol
srlf-3
Official Full Name
SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein
Primary source
WormBase:WBGene00016180
Locus tag
CELE_C28C12.4
See related
AllianceGenome:WB:WBGene00016180
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in pharyngeal muscle cell and tail neurons. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See srlf-3 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
2
Sequence:
Chromosome: IV; NC_003282.8 (8487483..8488490)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Saposin B-type domain-containing protein Neighboring gene Helix-loop-helix protein hlh-12 Neighboring gene Saposin B-type domain-containing protein Neighboring gene SXP /RAL-2-Like protein Family Neighboring gene Serpentine Receptor, class U

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Improved Biocompatibility of Amino-Functionalized Graphene Oxide in Caenorhabditis elegans. Rive C, et al. Small, 2019 Nov. PMID 31576668
  2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein
NP_501448.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    8487483..8488490
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069047.4 → NP_501448.1  SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_501448.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q18280
    Conserved Domains (1) summary
    pfam02520
    Location:59 → 158
    DUF148; Domain of unknown function DUF148
Nucleotide Protein
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