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C25D7.5 Metallo-beta-lactamase domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 182884, updated on 9-Dec-2024

Summary

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Official Symbol
C25D7.5
Official Full Name
Metallo-beta-lactamase domain-containing protein
Primary source
WormBase:WBGene00007717
Locus tag
CELE_C25D7.5
See related
AllianceGenome:WB:WBGene00007717
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Involved in innate immune response. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See C25D7.5 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (15053765..15056291)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Zinc finger protein sdc-3 Neighboring gene DUF38 domain-containing protein;F-box domain-containing protein Neighboring gene 40S ribosomal protein S20 Neighboring gene DNA replication licensing factor MCM3 Neighboring gene Uncharacterized protein Neighboring gene small monomeric GTPase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A conserved role for a GATA transcription factor in regulating epithelial innate immune responses. Shapira M, et al. Proc Natl Acad Sci U S A, 2006 Sep 19. PMID 16968778, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in innate immune response HEP PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Metallo-beta-lactamase domain-containing protein
NP_506705.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    15053765..15056291
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_074304.5 → NP_506705.2  Metallo-beta-lactamase domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_506705.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O17598
    Conserved Domains (1) summary
    cl23716
    Location:182 → 351
    metallo-hydrolase-like_MBL-fold; mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain
Nucleotide Protein
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