U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

mvb-12 Multivesicular body subunit 12A [ Caenorhabditis elegans ]

Gene ID: 182286, updated on 9-Dec-2024

Summary

Official Symbol
mvb-12
Official Full Name
Multivesicular body subunit 12A
Primary source
WormBase:WBGene00015508
Locus tag
CELE_C06A6.3
See related
AllianceGenome:WB:WBGene00015508
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable SH3 domain binding activity. Involved in endosome to lysosome transport via multivesicular body sorting pathway and receptor catabolic process. Located in cytosol and endosome membrane. Part of ESCRT I complex. Is expressed in amphid neurons; hypodermis; intestine; and pm7. Orthologous to several human genes including MVB12B (multivesicular body subunit 12B). [provided by Alliance of Genome Resources, Dec 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See mvb-12 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
6
Sequence:
Chromosome: IV; NC_003282.8 (7830525..7832435)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene N-acyl-aliphatic-L-amino acid amidohydrolase Neighboring gene Endoplasmic reticulum resident protein 44.2 Neighboring gene FTH domain-containing protein Neighboring gene ncRNA

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in endosome to lysosome transport via multivesicular body sorting pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in endosome to lysosome transport via multivesicular body sorting pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 
involved_in receptor catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in receptor catabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of epidermal growth factor receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in viral budding IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in virus maturation IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
part_of ESCRT I complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of ESCRT I complex IEA
Inferred from Electronic Annotation
more info
 
part_of ESCRT I complex IPI
Inferred from Physical Interaction
more info
PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 
located_in endosome membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in late endosome membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Multivesicular body subunit 12A
NP_501302.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    7830525..7832435
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_068901.8NP_501302.1  Multivesicular body subunit 12A [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_501302.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q17687
    Conserved Domains (1) summary
    pfam10240
    Location:16272
    DUF2464; Protein of unknown function (DUF2464)