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C04E12.5 PAW domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 182210, updated on 4-Jan-2025

Summary

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Official Symbol
C04E12.5
Official Full Name
PAW domain-containing protein
Primary source
WormBase:WBGene00015435
Locus tag
CELE_C04E12.5
See related
AllianceGenome:WB:WBGene00015435
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in glycoprotein catabolic process. Predicted to be located in cytoplasm and membrane. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See C04E12.5 in Genome Data Viewer
Location:
chromosome: V
Exon count:
12
Sequence:
Chromosome: V; NC_003283.11 (3358567..3361093)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Phospholipid scramblase Neighboring gene PAW domain-containing protein Neighboring gene DUF19 domain-containing protein Neighboring gene 7TM GPCR serpentine receptor class x (Srx) domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in glycoprotein catabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
PAW domain-containing protein
NP_001309618.1
  • Confirmed by transcript evidence
NP_503935.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    3358567..3361093
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071534.3 → NP_503935.2  PAW domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503935.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O76676
    Conserved Domains (1) summary
    smart00613
    Location:120 → 207
    PAW; domain present in PNGases and other hypothetical proteins

  2. NM_001322510.1 → NP_001309618.1  PAW domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A131MBK3
    Conserved Domains (1) summary
    smart00613
    Location:123 → 210
    PAW; domain present in PNGases and other hypothetical proteins
Nucleotide Protein
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