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C04E12.5 PAW domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 182210, updated on 9-Dec-2024

Summary

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Official Symbol
C04E12.5
Official Full Name
PAW domain-containing protein
Primary source
WormBase:WBGene00015435
Locus tag
CELE_C04E12.5
See related
AllianceGenome:WB:WBGene00015435
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity. Predicted to be involved in glycoprotein catabolic process and positive regulation of BMP signaling pathway. Predicted to be located in cytoplasm and membrane. Predicted to be active in cytosol and nucleus. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See C04E12.5 in Genome Data Viewer
Location:
chromosome: V
Exon count:
12
Sequence:
Chromosome: V; NC_003283.11 (3358567..3361093)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Phospholipid scramblase Neighboring gene PAW domain-containing protein Neighboring gene DUF19 domain-containing protein Neighboring gene 7TM GPCR serpentine receptor class x (Srx) domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in glycoprotein catabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
PAW domain-containing protein
NP_001309618.1
  • Confirmed by transcript evidence
NP_503935.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    3358567..3361093
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071534.3 → NP_503935.2  PAW domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503935.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O76676
    Conserved Domains (1) summary
    smart00613
    Location:120 → 207
    PAW; domain present in PNGases and other hypothetical proteins

  2. NM_001322510.1 → NP_001309618.1  PAW domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A131MBK3
    Conserved Domains (1) summary
    smart00613
    Location:123 → 210
    PAW; domain present in PNGases and other hypothetical proteins
Nucleotide Protein
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