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clec-51 C-type lectin domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 181854, updated on 4-Jan-2025

Summary

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Official Symbol
clec-51
Official Full Name
C-type lectin domain-containing protein
Primary source
WormBase:WBGene00015050
Locus tag
CELE_B0218.6
See related
AllianceGenome:WB:WBGene00015050
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable signaling receptor activity. Orthologous to several human genes including LY75-CD302 (LY75-CD302 readthrough); LY75 (lymphocyte antigen 75); and MRC2 (mannose receptor C-type 2). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See clec-51 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
7
Sequence:
Chromosome: IV; NC_003282.8 (8161953..8163800, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Protein kinase domain-containing protein Neighboring gene ncRNA Neighboring gene Fatty acid amide hydrolase 1 Neighboring gene Ovule protein Neighboring gene C-type lectin domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A C-type lectin of Caenorhabditis elegans: its sugar-binding property revealed by glycoconjugate microarray analysis. Takeuchi T, et al. Biochem Biophys Res Commun, 2008 Dec 5. PMID 18848522
  2. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  3. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables signaling receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
C-type lectin domain-containing protein
NP_001368439.1
  • Confirmed by transcript evidence
NP_501369.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    8161953..8163800 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_068968.7 → NP_501369.1  C-type lectin domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_501369.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q17450
    Conserved Domains (2) summary
    cd00037
    Location:32 → 149
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    smart00034
    Location:166 → 303
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)

  2. NM_001380354.1 → NP_001368439.1  C-type lectin domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    W6RTE8
    Conserved Domains (1) summary
    smart00034
    Location:42 → 179
    CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
Nucleotide Protein
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