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lep-5 [ Caenorhabditis elegans ]

Gene ID: 181411, updated on 9-Dec-2024

Summary

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Official Symbol
lep-5
Primary source
WormBase:WBGene00010424
Locus tag
CELE_H36L18.2
See related
AllianceGenome:WB:WBGene00010424
Gene type
ncRNA
RNA name
lncRNA
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in several structures, including hypodermal cell; nervous system; pharynx; somatic gonad; and vulva. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See lep-5 in Genome Data Viewer
Location:
chromosome: X
Exon count:
3
Sequence:
Chromosome: X; NC_003284.9 (12652591..12653520, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Peptidase metallopeptidase domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Makorin lep-2 and the lncRNA lep-5 regulate lin-28 to schedule sexual maturation of the C. elegans nervous system. Lawson H, et al. Elife, 2019 Jul 2. PMID 31264582, Free PMC Article
  2. The Long Non-Coding RNA lep-5 Promotes the Juvenile-to-Adult Transition by Destabilizing LIN-28. Kiontke KC, et al. Dev Cell, 2019 May 20. PMID 30956008, Free PMC Article
  3. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  4. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    12652591..12653520 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_149260.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

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