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scd-1 Suppressor of Constitutive Dauer formation [ Caenorhabditis elegans ]

Gene ID: 181408, updated on 2-Nov-2024

Summary

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Official Symbol
scd-1
Official Full Name
Suppressor of Constitutive Dauer formation
Primary source
WormBase:WBGene00004739
Locus tag
CELE_H20J18.1
See related
AllianceGenome:WB:WBGene00004739
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in body wall musculature; intestine; nervous system; and reproductive system. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See scd-1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
14
Sequence:
Chromosome: X; NC_003284.9 (12503887..12525789, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Lipase Neighboring gene SKN-1 Dependent Zygotic transcript Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Suppressors of transforming growth factor-beta pathway mutants in the Caenorhabditis elegans dauer formation pathway. Inoue T, et al. Genetics, 2000 Nov. PMID 11063683, Free PMC Article
  2. Targets of TGF beta-related signaling in Caenorhabditis elegans. Savage-Dunn C. Cytokine Growth Factor Rev, 2001 Dec. PMID 11544101
  3. C. elegans longevity pathways converge to decrease mitochondrial membrane potential. Lemire BD, et al. Mech Ageing Dev, 2009 Jul. PMID 19442682
  4. Coordinate regulation of lipid metabolism by novel nuclear receptor partnerships. Pathare PP, et al. PLoS Genet, 2012. PMID 22511885, Free PMC Article
  5. Ubiquitin-mediated pathways in C. elegans. Kipreos ET. WormBook, 2005 Dec 1. PMID 18050424, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Suppressor of Constitutive Dauer formation
NP_001360646.1
  • Confirmed by transcript evidence
NP_001360782.1
  • Confirmed by transcript evidence
NP_001360784.1
  • Confirmed by transcript evidence
NP_001367017.1
  • Partially confirmed by transcript evidence
NP_001368761.1
  • Confirmed by transcript evidence
NP_001368762.1
  • Confirmed by transcript evidence
NP_001368763.1
  • Confirmed by transcript evidence
NP_741912.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    12503887..12525789 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001373534.4 → NP_001360782.1  Suppressor of Constitutive Dauer formation [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A4V0IL24

  2. NM_001381120.2 → NP_001368763.1  Suppressor of Constitutive Dauer formation [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A4V0INV4

  3. NM_001373535.3 → NP_001360784.1  Suppressor of Constitutive Dauer formation [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A4V0INN2

  4. NM_001381123.3 → NP_001368762.1  Suppressor of Constitutive Dauer formation [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A4V0IKH6

  5. NM_171974.8 → NP_741912.1  Suppressor of Constitutive Dauer formation [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_741912.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XXK5

  6. NM_001381122.2 → NP_001367017.1  Suppressor of Constitutive Dauer formation [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MQ12

  7. NM_001381121.2 → NP_001368761.1  Suppressor of Constitutive Dauer formation [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A4V0IKL1

  8. NM_001373531.3 → NP_001360646.1  Suppressor of Constitutive Dauer formation [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A4V0IN69
Nucleotide Protein
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