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F42F12.4 Acireductone dioxygenase [ Caenorhabditis elegans ]

Gene ID: 181393, updated on 4-Jan-2025

Summary

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Official Symbol
F42F12.4
Official Full Name
Acireductone dioxygenase
Primary source
WormBase:WBGene00009636
Locus tag
CELE_F42F12.4
See related
AllianceGenome:WB:WBGene00009636
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable acireductone dioxygenase [iron(II)-requiring] activity. Predicted to be involved in methionine metabolic process. Predicted to be located in cytoplasm and nucleus. Orthologous to human ADI1 (acireductone dioxygenase 1). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See F42F12.4 in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Sequence:
Chromosome: X; NC_003284.9 (12351995..12352947, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Cysteine-rich transmembrane CYSTM domain-containing protein Neighboring gene 3-oxo-5-alpha-steroid 4-dehydrogenase Neighboring gene pseudo Neighboring gene Nematode Specific Peptide family, group C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables acireductone dioxygenase (Ni2+-requiring) activity IEA
Inferred from Electronic Annotation
more info
  
enables acireductone dioxygenase [iron(II)-requiring] activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables acireductone dioxygenase [iron(II)-requiring] activity IEA
Inferred from Electronic Annotation
more info
  
enables dioxygenase activity IEA
Inferred from Electronic Annotation
more info
  
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables nickel cation binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in L-methionine salvage from methylthioadenosine IEA
Inferred from Electronic Annotation
more info
  
involved_in methionine biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
involved_in methionine metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Acireductone dioxygenase
NP_510072.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    12351995..12352947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_077671.6 → NP_510072.1  Acireductone dioxygenase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_510072.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20340, Q20341
    Conserved Domains (1) summary
    pfam03079
    Location:1 → 156
    ARD; ARD/ARD' family
Nucleotide Protein
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