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C34F6.7 Transmembrane protein [ Caenorhabditis elegans ]

Gene ID: 181310, updated on 9-Dec-2024

Summary

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Official Symbol
C34F6.7
Official Full Name
Transmembrane protein
Primary source
WormBase:WBGene00007941
Locus tag
CELE_C34F6.7
See related
AllianceGenome:WB:WBGene00007941
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in protein ubiquitination. Predicted to be located in membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human TMEM129 (transmembrane protein 129, E3 ubiquitin ligase). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See C34F6.7 in Genome Data Viewer
Location:
chromosome: X
Exon count:
10
Sequence:
Chromosome: X; NC_003284.9 (11210107..11215470, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Heparan sulfate 2-O-sulfotransferase hst-2 Neighboring gene NR LBD domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Isocitrate dehydrogenase [NADP] Neighboring gene USP domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003284.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Transmembrane protein
NP_509874.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    11210107..11215470 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_077473.9 → NP_509874.1  Transmembrane protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_509874.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O17638
    Conserved Domains (1) summary
    pfam10272
    Location:46 → 400
    Tmpp129; Putative transmembrane protein precursor
Nucleotide Protein
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