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fkh-9 Forkhead transcription factor fkh-9 [ Caenorhabditis elegans ]

Gene ID: 180670, updated on 2-Nov-2024

Summary

Official Symbol
fkh-9
Official Full Name
Forkhead transcription factor fkh-9
Primary source
WormBase:WBGene00001441
Locus tag
CELE_K03C7.2
See related
AllianceGenome:WB:WBGene00001441
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Enables DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in several processes, including axon regeneration; determination of adult lifespan; and learning or memory. Acts upstream of or within ERAD pathway and defense response to other organism. Located in nucleus. Is expressed in several structures, including hypodermis; intestine; neurons; rectal valve cell; and somatic nervous system. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See fkh-9 in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Sequence:
Chromosome: X; NC_003284.9 (3816851..3826963, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Secreted protein Neighboring gene Titin-like Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Forkhead transcription factor fkh-9
NP_001024760.1
  • Confirmed by transcript evidence
NP_001024761.1
  • Confirmed by transcript evidence
NP_001379922.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    3816851..3826963 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001029589.4NP_001024760.1  Forkhead transcription factor fkh-9 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q21187, Q2L6X6, Q7Z136
    Conserved Domains (1) summary
    smart00339
    Location:66153
    FH; FORKHEAD
  2. NM_001029590.7NP_001024761.1  Forkhead transcription factor fkh-9 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7Z136
    Conserved Domains (1) summary
    smart00339
    Location:46133
    FH; FORKHEAD
  3. NM_001392752.1NP_001379922.1  Forkhead transcription factor fkh-9 [Caenorhabditis elegans]

    Status: REVIEWED