F26F2.7 Protein TAPT1 homolog [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: F26F2.7
Official Full Name: Protein TAPT1 homolog
Primary source: WormBase:WBGene00009172
Locus tag: CELE_F26F2.7
See related: AllianceGenome:WB:WBGene00009172
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to be involved in positive regulation of cilium assembly. Predicted to be located in membrane. Predicted to be active in ciliary basal body and endoplasmic reticulum membrane. Orthologous to human TAPT1 (transmembrane anterior posterior transformation 1). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See F26F2.7 in Genome Data Viewer

Location:: chromosome: V

Exon count:: 15

Sequence:: Chromosome: V; NC_003283.11 (20580990..20590339)

Chromosome V - NC_003283.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

F26F2.7 (e-PCR)
- UniSTS:319282

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Process	Evidence Code	Pubs
involved_in positive regulation of cilium assembly	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in ciliary basal body	IBA Inferred from Biological aspect of Ancestor more info
is_active_in endoplasmic reticulum membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: Protein TAPT1 homolog

NP_001355520.1

Confirmed by transcript evidence

NP_001355522.1

Confirmed by transcript evidence

NP_001370996.1

Confirmed by transcript evidence

NP_507972.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003283.11 Reference assembly

Range

20580990..20590339

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001368486.2 → NP_001355520.1 Protein TAPT1 homolog [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A0A3P6MY96

Conserved Domains (1) summary

pfam05346
Location:223 → 528

DUF747; Eukaryotic membrane protein family
NM_075571.6 → NP_507972.1 Protein TAPT1 homolog [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_507972.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q9U3H8

Conserved Domains (1) summary

pfam05346
Location:221 → 526

DUF747; Eukaryotic membrane protein family
NM_001383511.2 → NP_001370996.1 Protein TAPT1 homolog [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A0A3P6NNU2

Conserved Domains (1) summary

pfam05346
Location:13 → 318

DUF747; Eukaryotic membrane protein family
NM_001368488.5 → NP_001355522.1 Protein TAPT1 homolog [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A0A3P6P9A6

Conserved Domains (1) summary

pfam05346
Location:1 → 182

DUF747; Eukaryotic membrane protein family