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Y37H2A.1 Deoxyribonuclease TATDN2 [ Caenorhabditis elegans ]

Gene ID: 180186, updated on 9-Dec-2024

Summary

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Official Symbol
Y37H2A.1
Official Full Name
Deoxyribonuclease TATDN2
Primary source
WormBase:WBGene00012562
Locus tag
CELE_Y37H2A.1
See related
AllianceGenome:WB:WBGene00012562
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable hydrolase activity, acting on ester bonds. Orthologous to human TATDN2 (TatD DNase domain containing 2). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See Y37H2A.1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (18108269..18114755)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Synthetic with Lin-35/Rb Neighboring gene Serine/threonine-protein kinase par-4 Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene F-box domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional identification of microRNA-centered complexes in C. elegans. Hebbar S, et al. Sci Rep, 2022 May 3. PMID 35504914, Free PMC Article
  2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Deoxyribonuclease TATDN2
NP_001256781.1
  • Confirmed by transcript evidence
NP_001256782.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    18108269..18114755
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001269852.2 → NP_001256781.1  Deoxyribonuclease TATDN2 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256781.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9U2N7
    Conserved Domains (1) summary
    pfam01026
    Location:177 → 473
    TatD_DNase; TatD related DNase

  2. NM_001269853.3 → NP_001256782.1  Deoxyribonuclease TATDN2 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256782.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F3Y5R9
    Conserved Domains (1) summary
    pfam01026
    Location:102 → 398
    TatD_DNase; TatD related DNase
Nucleotide Protein
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