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C01G10.1 BRCT domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 180019, updated on 9-Dec-2024

Summary

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Official Symbol
C01G10.1
Official Full Name
BRCT domain-containing protein
Primary source
WormBase:WBGene00007230
Locus tag
CELE_C01G10.1
See related
AllianceGenome:WB:WBGene00007230
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See C01G10.1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
12
Sequence:
Chromosome: V; NC_003283.11 (15099747..15104405)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene 7TM GPCR serpentine receptor class x (Srx) domain-containing protein Neighboring gene pseudo Neighboring gene pseudo Neighboring gene Major sperm protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
BRCT domain-containing protein
NP_506722.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    15099747..15104405
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_074321.3 → NP_506722.2  BRCT domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_506722.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q93161
    Conserved Domains (4) summary
    smart00453
    Location:23 → 91
    WSN; Worm-specific (usually) N-terminal domain
    smart00292
    Location:991 → 1063
    BRCT; breast cancer carboxy-terminal domain
    cd00204
    Location:872 → 944
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:907 → 938
    ANK; ANK repeat [structural motif]
Nucleotide Protein
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