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F47B8.4 Glutaredoxin domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 179930, updated on 9-Dec-2024

Summary

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Official Symbol
F47B8.4
Official Full Name
Glutaredoxin domain-containing protein
Primary source
WormBase:WBGene00009805
Locus tag
CELE_F47B8.4
See related
AllianceGenome:WB:WBGene00009805
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Involved in innate immune response. Predicted to be active in mitochondrial matrix. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See F47B8.4 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (14323528..14324673, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Skin secretory protein xP2-like Neighboring gene Glutaredoxin domain-containing protein Neighboring gene Skin secretory protein xP2-like Neighboring gene ncRNA Neighboring gene Methyltransferase FkbM domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A conserved role for a GATA transcription factor in regulating epithelial innate immune responses. Shapira M, et al. Proc Natl Acad Sci U S A, 2006 Sep 19. PMID 16968778, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in innate immune response HEP PubMed 
Component Evidence Code Pubs
is_active_in mitochondrial matrix IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Glutaredoxin domain-containing protein
NP_001256578.1
  • Confirmed by transcript evidence
NP_001256579.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    14323528..14324673 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001269650.2 → NP_001256579.1  Glutaredoxin domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256579.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20518
    Conserved Domains (1) summary
    cl00388
    Location:185 → 228
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold

  2. NM_001269649.4 → NP_001256578.1  Glutaredoxin domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256578.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2FLI1
    Conserved Domains (1) summary
    cl00388
    Location:219 → 262
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold
Nucleotide Protein
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