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papl-1 Purple acid phosphatase [ Caenorhabditis elegans ]

Gene ID: 179747, updated on 4-Jan-2025

Summary

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Official Symbol
papl-1
Official Full Name
Purple acid phosphatase
Primary source
WormBase:WBGene00008936
Locus tag
CELE_F18E2.1
See related
AllianceGenome:WB:WBGene00008936
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable acid phosphatase activity and metal ion binding activity. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See papl-1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
8
Sequence:
Chromosome: V; NC_003283.11 (12757565..12759760, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene G-protein alpha subunit;Guanine nucleotide-binding protein alpha-13 subunit Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene ABC transporter domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identifying evolutionarily conserved genes in the dietary restriction response using bioinformatics and subsequent testing in Caenorhabditis elegans. Ludewig AH, et al. Genes Nutr, 2014 Jan. PMID 24311442, Free PMC Article
  2. RNA targets and specificity of Staufen, a double-stranded RNA-binding protein in Caenorhabditis elegans. LeGendre JB, et al. J Biol Chem, 2013 Jan 25. PMID 23195953, Free PMC Article
  3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  4. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  5. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables acid phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Purple acid phosphatase
NP_001256452.1
  • Confirmed by transcript evidence
NP_001256453.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    12757565..12759760 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001269523.2 → NP_001256452.1  Purple acid phosphatase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256452.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q19553
    Conserved Domains (3) summary
    cd00839
    Location:112 → 413
    MPP_PAPs; purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain
    pfam00149
    Location:116 → 323
    Metallophos; Calcineurin-like phosphoesterase
    pfam16656
    Location:24 → 108
    Pur_ac_phosph_N; Purple acid Phosphatase, N-terminal domain

  2. NM_001269524.3 → NP_001256453.1  Purple acid phosphatase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256453.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F5GUC7
    Conserved Domains (3) summary
    cd00839
    Location:78 → 379
    MPP_PAPs; purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain
    pfam00149
    Location:82 → 289
    Metallophos; Calcineurin-like phosphoesterase
    pfam16656
    Location:2 → 74
    Pur_ac_phosph_N; Purple acid Phosphatase, N-terminal domain
Nucleotide Protein
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