U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

D2023.1 Cytochrome b5 heme-binding domain-containing protein;Serpentine Receptor, class T [ Caenorhabditis elegans ]

Gene ID: 179615, updated on 4-Jan-2025

Summary

Go to the top of the page Help
Official Symbol
D2023.1
Official Full Name
Cytochrome b5 heme-binding domain-containing protein;Serpentine Receptor, class T
Primary source
WormBase:WBGene00014300
Locus tag
CELE_D2023.1
See related
AllianceGenome:WB:WBGene00014300
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable heme binding activity and metal ion binding activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Jan 2025]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See D2023.1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
13
Sequence:
Chromosome: V; NC_003283.11 (11789550..11800544)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Phosphoglycerate mutase family protein Neighboring gene RING-CH-type domain-containing protein Neighboring gene Reverse transcriptase domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene C2 domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in sensory perception of chemical stimulus IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Cytochrome b5 heme-binding domain-containing protein;Serpentine Receptor, class T
NP_001256371.1
  • Confirmed by transcript evidence
NP_001256372.1
  • Confirmed by transcript evidence
NP_001364652.1
  • Confirmed by transcript evidence
NP_001367225.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    11789550..11800544
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001269442.2 → NP_001256371.1  Serpentine Receptor, class T [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256371.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EGM5
    Conserved Domains (1) summary
    pfam03125
    Location:91 → 209
    Sre; C. elegans Sre G protein-coupled chemoreceptor

  2. NM_001269443.4 → NP_001256372.1  Serpentine Receptor, class T [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256372.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EBI9
    Conserved Domains (1) summary
    pfam03125
    Location:96 → 214
    Sre; C. elegans Sre G protein-coupled chemoreceptor

  3. NM_001380774.1 → NP_001367225.1  Cytochrome b5 heme-binding domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    D1MN82

  4. NM_001377606.2 → NP_001364652.1  Cytochrome b5 heme-binding domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q2L6U6
    Conserved Domains (1) summary
    pfam00173
    Location:7 → 78
    Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain

RNA

  1. NR_003168.3 RNA Sequence

    Status: REVIEWED

  2. NR_003167.3 RNA Sequence

    Status: REVIEWED

  3. NR_003166.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools