U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

tre-3 Trehalase [ Caenorhabditis elegans ]

Gene ID: 179604, updated on 9-Dec-2024

Summary

Go to the top of the page Help
Official Symbol
tre-3
Official Full Name
Trehalase
Primary source
WormBase:WBGene00006609
Locus tag
CELE_W05E10.4
See related
AllianceGenome:WB:WBGene00006609
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable alpha,alpha-trehalase activity. Predicted to be involved in trehalose catabolic process. Located in membrane raft. Is expressed in several structures, including head; intestine; rectal gland cell; reproductive system; and tail. Orthologous to human TREH (trehalase). [provided by Alliance of Genome Resources, Dec 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See tre-3 in Genome Data Viewer
Location:
chromosome: V
Exon count:
11
Sequence:
Chromosome: V; NC_003283.11 (11709769..11715903, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Receptor-type guanylate cyclase daf-11;guanylate cyclase Neighboring gene Ammonium transporter AmtB-like domain-containing protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Origins of recently gained introns in Caenorhabditis. Coghlan A, et al. Proc Natl Acad Sci U S A, 2004 Aug 3. PMID 15243155, Free PMC Article
  2. Trehalose metabolism genes in Caenorhabditis elegans and filarial nematodes. Pellerone FI, et al. Int J Parasitol, 2003 Sep 30. PMID 13678635
  3. An analysis of the Caenorhabditis elegans lipid raft proteome using geLC-MS/MS. Rao W, et al. J Proteomics, 2011 Feb 1. PMID 21070894
  4. Transcriptomics of ivermectin response in Caenorhabditis elegans: Integrating abamectin quantitative trait loci and comparison to the Ivermectin-exposed DA1316 strain. Dube F, et al. PLoS One, 2023. PMID 37141255, Free PMC Article
  5. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables alpha,alpha-trehalase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables alpha,alpha-trehalase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity, acting on glycosyl bonds IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in trehalose catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in trehalose metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane raft HDA PubMed 

General protein information

Go to the top of the page Help
Preferred Names
Trehalase
NP_001256361.1
  • Confirmed by transcript evidence
NP_001256362.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    11709769..11715903 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001269432.3 → NP_001256361.1  Trehalase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256361.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F5GUD3, G5EG27
    Conserved Domains (1) summary
    cl17346
    Location:40 → 560
    Trehalase; Trehalase

  2. NM_001269433.3 → NP_001256362.1  Trehalase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256362.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F5GUD4
    Conserved Domains (1) summary
    cl17346
    Location:3 → 49
    Trehalase; Trehalase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools