U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ddo-2 D-aspartate oxidase 2 [ Caenorhabditis elegans ]

Gene ID: 179130, updated on 2-Nov-2024

Summary

Official Symbol
ddo-2
Official Full Name
D-aspartate oxidase 2
Primary source
WormBase:WBGene00017565
Locus tag
CELE_F18E3.7
See related
AllianceGenome:WB:WBGene00017565
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Enables D-aspartate oxidase activity and D-glutamate oxidase activity. Involved in aspartate catabolic process. Predicted to be located in peroxisomal matrix. Predicted to be active in cytoplasm. Is expressed in body wall musculature; intestinal cell; and pharyngeal muscle cell. [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See ddo-2 in Genome Data Viewer
Location:
chromosome: V
Exon count:
7
Sequence:
Chromosome: V; NC_003283.11 (7433401..7435032, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene pseudo Neighboring gene Histidine-rich glycoprotein;S39A8 protein Neighboring gene Secreted protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables D-amino-acid oxidase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables D-amino-acid oxidase activity IEA
Inferred from Electronic Annotation
more info
 
enables D-aspartate oxidase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables D-aspartate oxidase activity IEA
Inferred from Electronic Annotation
more info
 
enables D-glutamate oxidase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables D-glutamate oxidase activity IEA
Inferred from Electronic Annotation
more info
 
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 
enables FAD binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in D-amino acid catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in D-amino acid catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in D-amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in aspartate catabolic process IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in peroxisomal matrix ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
D-aspartate oxidase 2
NP_001370668.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    7433401..7435032 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001383337.2NP_001370668.1  D-aspartate oxidase 2 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q08I99, Q19564, Q8I7K8
    Conserved Domains (1) summary
    pfam01266
    Location:7327
    DAO; FAD dependent oxidoreductase

RNA

  1. NR_136371.1 RNA Sequence

    Status: REVIEWED