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srj-14 Serpentine Receptor, class J [ Caenorhabditis elegans ]

Gene ID: 179124, updated on 9-Dec-2024

Summary

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Official Symbol
srj-14
Official Full Name
Serpentine Receptor, class J
Primary source
WormBase:WBGene00005602
Locus tag
CELE_C03G6.3
See related
AllianceGenome:WB:WBGene00005602
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See srj-14 in Genome Data Viewer
Location:
chromosome: V
Exon count:
8
Sequence:
Chromosome: V; NC_003283.11 (7369708..7372131)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Excretory canal abnormal exc-13 Neighboring gene pseudo Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine Receptor, class J
NP_504884.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    7369708..7372131
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_072483.6 → NP_504884.1  Serpentine Receptor, class J [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_504884.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O01456
    Conserved Domains (1) summary
    pfam10319
    Location:1 → 312
    7TM_GPCR_Srj; Serpentine type 7TM GPCR chemoreceptor Srj

RNA

  1. NR_131691.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
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Gene LinkOut

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