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gei-6 GEX Interacting protein [ Caenorhabditis elegans ]

Gene ID: 179114, updated on 18-Sep-2024

Summary

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Official Symbol
gei-6
Official Full Name
GEX Interacting protein
Primary source
WormBase:WBGene00001563
Locus tag
CELE_C05C8.4
See related
AllianceGenome:WB:WBGene00001563
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See gei-6 in Genome Data Viewer
Location:
chromosome: V
Exon count:
8
Sequence:
Chromosome: V; NC_003283.11 (7226376..7230848, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene 50S ribosomal protein L6 Neighboring gene ncRNA Neighboring gene peptidylprolyl isomerase Neighboring gene KRR1 small subunit processome component Neighboring gene Exonuclease domain-containing protein Neighboring gene BTB/POZ domain-containing protein 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Caenorhabditis elegans mutant allele identification by whole-genome sequencing. Sarin S, et al. Nat Methods, 2008 Oct. PMID 18677319, Free PMC Article
  2. Isolation of the interacting molecules with GEX-3 by a novel functional screening. Tsuboi D, et al. Biochem Biophys Res Commun, 2002 Apr 5. PMID 11922622
  3. SH3 interactome conserves general function over specific form. Xin X, et al. Mol Syst Biol, 2013. PMID 23549480, Free PMC Article
  4. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
GEX Interacting protein
NP_504836.1
  • Product from WormBase gene class gei;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    7226376..7230848 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_072435.7 → NP_504836.1  GEX Interacting protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_504836.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O16310
    Conserved Domains (2) summary
    PRK12323
    Location:601 → 805
    PRK12323; DNA polymerase III subunits gamma and tau; Provisional
    TIGR02169
    Location:361 → 605
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
Nucleotide Protein
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