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era-1 Embryonic mRna (mRNA) Anterior [ Caenorhabditis elegans ]

Gene ID: 179061, updated on 9-Dec-2024

Summary

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Official Symbol
era-1
Official Full Name
Embryonic mRna (mRNA) Anterior
Primary source
WormBase:WBGene00020948
Locus tag
CELE_W02F12.3
See related
AllianceGenome:WB:WBGene00020948
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Located in cell cortex. Is expressed in several structures, including AB; AB lineage cell; ABa; P0; and germ line. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See era-1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (6703057..6704573)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Alkaline ceramidase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Exonuclease domain-containing protein Neighboring gene Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Polarity-dependent asymmetric distribution and MEX-5/6-mediated translational activation of the Era-1 mRNA in C. elegans embryos. Spiró Z, et al. PLoS One, 2015. PMID 25821955, Free PMC Article
  2. Microtubule severing by the katanin complex is activated by PPFR-1-dependent MEI-1 dephosphorylation. Gomes JE, et al. J Cell Biol, 2013 Aug 5. PMID 23918937, Free PMC Article
  3. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cell cortex IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Embryonic mRna (mRNA) Anterior
NP_504698.1
  • Product from WormBase gene class era;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    6703057..6704573
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_072297.6 → NP_504698.1  Embryonic mRna (mRNA) Anterior [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_504698.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O45146
    Conserved Domains (1) summary
    PHA03307
    Location:40 → 318
    PHA03307; transcriptional regulator ICP4; Provisional
Nucleotide Protein
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