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Y45G5AM.6 Activin_recp domain-containing protein;Protein sleepless [ Caenorhabditis elegans ]

Gene ID: 178815, updated on 4-Jan-2025

Summary

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Official Symbol
Y45G5AM.6
Official Full Name
Activin_recp domain-containing protein;Protein sleepless
Primary source
WormBase:WBGene00021558
Locus tag
CELE_Y45G5AM.6
See related
AllianceGenome:WB:WBGene00021558
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Located in striated muscle dense body. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See Y45G5AM.6 in Genome Data Viewer
Location:
chromosome: V
Exon count:
8
Sequence:
Chromosome: V; NC_003283.11 (4147550..4152300, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Nuclear hormone receptor family member nhr-57 Neighboring gene Neur_chan_LBD domain-containing protein Neighboring gene Neurotransmitter-gated ion-channel ligand-binding domain-containing protein Neighboring gene Late endosomal/lysosomal adaptor and MAPK and MTOR activator 1 Neighboring gene ncRNA Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Determining the sub-cellular localization of proteins within Caenorhabditis elegans body wall muscle. Meissner B, et al. PLoS One, 2011. PMID 21611156, Free PMC Article
  2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
located_in striated muscle dense body HDA PubMed 

General protein information

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Preferred Names
Activin_recp domain-containing protein;Protein sleepless
NP_001317848.1
  • Confirmed by transcript evidence
NP_504156.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    4147550..4152300 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071755.4 → NP_504156.1  Activin_recp domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_504156.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9GUJ2

  2. NM_001330831.3 → NP_001317848.1  Protein sleepless [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A168HB31
Nucleotide Protein
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