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dhs-13 DeHydrogenases, Short chain [ Caenorhabditis elegans ]

Gene ID: 178658, updated on 2-Nov-2024

Summary

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Official Symbol
dhs-13
Official Full Name
DeHydrogenases, Short chain
Primary source
WormBase:WBGene00000976
Locus tag
CELE_F36H9.3
See related
AllianceGenome:WB:WBGene00000976
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable carbonyl reductase (NADPH) activity. Orthologous to several human genes including DHRS2 (dehydrogenase/reductase 2); DHRS4 (dehydrogenase/reductase 4); and DHRS4L2 (dehydrogenase/reductase 4 like 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See dhs-13 in Genome Data Viewer
Location:
chromosome: V
Exon count:
4
Sequence:
Chromosome: V; NC_003283.11 (1765311..1771734, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene C-type lectin domain-containing protein Neighboring gene C-type lectin domain-containing protein Neighboring gene UPAR/Ly6 domain-containing protein Neighboring gene TIL domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bioinformatic and biochemical characterization of DCXR and DHRS2/4 from Caenorhabditis elegans. Kisiela M, et al. Chem Biol Interact, 2011 May 30. PMID 21300042
  2. Molecular and functional evolution of human DHRS2 and DHRS4 duplicated genes. Gabrielli F, et al. Gene, 2012 Dec 15. PMID 23036705
  3. Comparative genomics and functional study of lipid metabolic genes in Caenorhabditis elegans. Zhang Y, et al. BMC Genomics, 2013 Mar 12. PMID 23496871, Free PMC Article
  4. In Vivo Interaction Proteomics in Caenorhabditis elegans Embryos Provides New Insights into P Granule Dynamics. Chen JX, et al. Mol Cell Proteomics, 2016 May. PMID 26912668, Free PMC Article
  5. SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans. Robert VJ, et al. Development, 2023 Nov 1. PMID 37818613, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables carbonyl reductase (NADPH) activity IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
DeHydrogenases, Short chain
NP_503501.1
  • Product from WormBase gene class dhs;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    1765311..1771734 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071100.2 → NP_503501.1  DeHydrogenases, Short chain [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_503501.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O16619
    Conserved Domains (2) summary
    PRK07231
    Location:9 → 253
    fabG; 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
    cl21454
    Location:9 → 257
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
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