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emc-3 ER membrane protein complex subunit 3 [ Caenorhabditis elegans ]

Gene ID: 178300, updated on 9-Dec-2024

Summary

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Official Symbol
emc-3
Official Full Name
ER membrane protein complex subunit 3
Primary source
WormBase:WBGene00013378
Locus tag
CELE_Y62E10A.10
See related
AllianceGenome:WB:WBGene00013378
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Predicted to be part of EMC complex. Orthologous to human EMC3 (ER membrane protein complex subunit 3). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See emc-3 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
3
Sequence:
Chromosome: IV; NC_003282.8 (13380385..13381923, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Ribonuclease P protein subunit p20 Neighboring gene Protein kish Neighboring gene NADPH:adrenodoxin oxidoreductase, mitochondrial Neighboring gene Phosducin domain-containing protein;Phosducin thioredoxin-like domain-containing protein Neighboring gene Ras-related protein Rab-10 Neighboring gene Tim44-like domain-containing protein Neighboring gene Mediator complex subunit 9 Neighboring gene Guanine nucleotide exchange factor MSS4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
  2. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  4. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  5. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
part_of EMC complex IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ER membrane protein complex subunit 3
NP_502575.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    13380385..13381923 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_070174.8 → NP_502575.1  ER membrane protein complex subunit 3 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502575.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9U1X6
    Conserved Domains (1) summary
    pfam01956
    Location:3 → 188
    DUF106; Integral membrane protein DUF106
Nucleotide Protein
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