U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

JC8.4 CMP/dCMP-type deaminase domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 178281, updated on 4-Jan-2025

Summary

Go to the top of the page Help
Official Symbol
JC8.4
Official Full Name
CMP/dCMP-type deaminase domain-containing protein
Primary source
WormBase:WBGene00010436
Locus tag
CELE_JC8.4
See related
AllianceGenome:WB:WBGene00010436
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable tRNA-specific adenosine-34 deaminase activity. Predicted to be involved in tRNA wobble adenosine to inosine editing. Orthologous to human ADAT2 (adenosine deaminase tRNA specific 2). [provided by Alliance of Genome Resources, Jan 2025]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See JC8.4 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_003282.8 (13243675..13244205)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Large ribosomal subunit protein uL11 Neighboring gene CRC domain-containing protein;Protein lin-54 Neighboring gene Cytochrome c oxidase assembly protein COX11, mitochondrial Neighboring gene Zinc finger, CCHC-type Neighboring gene Transthyretin-like family protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables tRNA-specific adenosine-34 deaminase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in tRNA wobble adenosine to inosine editing IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
CMP/dCMP-type deaminase domain-containing protein
NP_502546.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    13243675..13244205
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_070145.3 → NP_502546.1  CMP/dCMP-type deaminase domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502546.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95QD6
    Conserved Domains (1) summary
    COG0590
    Location:3 → 155
    TadA; tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools