tgt-1 Queuine tRNA-ribosyltransferase catalytic subunit [Caenorhabditis elegans] - Gene

Summary

Go to the top of the page Help

Official Symbol: tgt-1
Official Full Name: Queuine tRNA-ribosyltransferase catalytic subunit
Primary source: WormBase:WBGene00006566
Locus tag: CELE_ZK829.6
See related: AllianceGenome:WB:WBGene00006566
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable tRNA-guanosine(34) queuine transglycosylase activity. Predicted to be involved in tRNA-guanine transglycosylation. Predicted to be located in cytoplasm. Orthologous to human QTRT1 (queuine tRNA-ribosyltransferase catalytic subunit 1). [provided by Alliance of Genome Resources, Dec 2024]
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

See tgt-1 in Genome Data Viewer

Location:: chromosome: IV

Exon count:: 3

Sequence:: Chromosome: IV; NC_003282.8 (11957547..11959804, complement)

Chromosome IV - NC_003282.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:: NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help

Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

Go to the top of the page Help

Markers

ZK829.6 (e-PCR)
- UniSTS:310551

ZK829.7 (e-PCR)
- UniSTS:310552

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables glycosyltransferase activity	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables pentosyltransferase activity	IEA Inferred from Electronic Annotation more info
enables tRNA-guanosine(34) queuine transglycosylase activity	IBA Inferred from Biological aspect of Ancestor more info
enables tRNA-guanosine(34) queuine transglycosylase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in tRNA modification	IEA Inferred from Electronic Annotation more info
involved_in tRNA processing	IEA Inferred from Electronic Annotation more info
involved_in tRNA-guanine transglycosylation	IBA Inferred from Biological aspect of Ancestor more info
involved_in tRNA-guanine transglycosylation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

Go to the top of the page Help

Preferred Names: Queuine tRNA-ribosyltransferase catalytic subunit

NP_502268.2

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003282.8 Reference assembly

Range

11957547..11959804 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_069867.8 → NP_502268.2 Queuine tRNA-ribosyltransferase catalytic subunit [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/Swiss-Prot

Q23623

Conserved Domains (1) summary

cl19224
Location:13 → 374

TGT; Queuine tRNA-ribosyltransferase