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F58B3.6 Interferon-related developmental regulator N-terminal domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 178090, updated on 4-Jan-2025

Summary

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Official Symbol
F58B3.6
Official Full Name
Interferon-related developmental regulator N-terminal domain-containing protein
Primary source
WormBase:WBGene00010232
Locus tag
CELE_F58B3.6
See related
AllianceGenome:WB:WBGene00010232
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Orthologous to several human genes including IFRD2 (interferon related developmental regulator 2). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See F58B3.6 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
3
Sequence:
Chromosome: IV; NC_003282.8 (11636648..11638208)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene NUC153 domain-containing protein Neighboring gene Methionine--tRNA ligase, cytoplasmic;tRNA-binding domain-containing protein Neighboring gene ncRNA Neighboring gene Splicing factor 45 Neighboring gene Transthyretin-like family protein Neighboring gene Tyrosine-protein phosphatase domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly. Schaan Profes M, et al. PLoS Biol, 2024 Jan. PMID 38252619, Free PMC Article
  2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Interferon-related developmental regulator N-terminal domain-containing protein
NP_502197.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    11636648..11638208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069796.7 → NP_502197.2  Interferon-related developmental regulator N-terminal domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502197.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20965
    Conserved Domains (2) summary
    pfam04836
    Location:359 → 407
    IFRD_C; Interferon-related protein conserved region
    pfam05004
    Location:47 → 312
    IFRD; Interferon-related developmental regulator (IFRD)
Nucleotide Protein
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