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nsph-3.1 Nematode Specific Peptide family [ Caenorhabditis elegans ]

Gene ID: 177992, updated on 18-Sep-2024

Summary

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Official Symbol
nsph-3.1
Official Full Name
Nematode Specific Peptide family
Primary source
WormBase:WBGene00013474
Locus tag
CELE_Y69E1A.2
See related
AllianceGenome:WB:WBGene00013474
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See nsph-3.1 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
3
Sequence:
Chromosome: IV; NC_003282.8 (10949810..10951133)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene MFS domain-containing protein Neighboring gene Tyrosine-protein kinase Neighboring gene Serine/threonine-protein phosphatase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. NHR-23 and SPE-44 regulate distinct sets of genes during Caenorhabditis elegans spermatogenesis. Ragle JM, et al. G3 (Bethesda), 2022 Nov 4. PMID 36135804, Free PMC Article
  2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  3. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Nematode Specific Peptide family
NP_502039.1
  • Confirmed by transcript evidence;
    Product from WormBase gene class nsph

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    10949810..10951133
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069638.6 → NP_502039.1  Nematode Specific Peptide family [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502039.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XW38
    Conserved Domains (1) summary
    pfam12150
    Location:8 → 359
    MFP2b; Cytosolic motility protein
Nucleotide Protein
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