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srlf-30 SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 177982, updated on 4-Jan-2025

Summary

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Official Symbol
srlf-30
Official Full Name
SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein
Primary source
WormBase:WBGene00014006
Locus tag
CELE_ZK596.1
See related
AllianceGenome:WB:WBGene00014006
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in g1AL; g1AR; g1P; g2L; and g2R. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See srlf-30 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
2
Sequence:
Chromosome: IV; NC_003282.8 (10900383..10901386)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene FIP (Fungus-Induced Protein) Related Neighboring gene Secreted protein Neighboring gene Transmembrane protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene non-specific serine/threonine protein kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptional regulation of HLH-6-independent and subtype-specific genes expressed in the Caenorhabditis elegans pharyngeal glands. Ghai V, et al. Mech Dev, 2012 Sep-Dec. PMID 22759833
  2. Multiple genes affect sensitivity of Caenorhabditis elegans to the bacterial pathogen Microbacterium nematophilum. Gravato-Nobre MJ, et al. Genetics, 2005 Nov. PMID 16079230, Free PMC Article
  3. Isolation and molecular identification of nematode surface mutants with resistance to bacterial pathogens. O'Rourke D, et al. G3 (Bethesda), 2023 May 2. PMID 36911920, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein
NP_502026.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    10900383..10901386
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069625.7 → NP_502026.1  SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502026.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q23545
    Conserved Domains (1) summary
    pfam02520
    Location:54 → 155
    DUF148; Domain of unknown function DUF148
Nucleotide Protein
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