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R102.2 DUF4440 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 177959, updated on 4-Jan-2025

Summary

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Official Symbol
R102.2
Official Full Name
DUF4440 domain-containing protein
Primary source
WormBase:WBGene00011289
Locus tag
CELE_R102.2
See related
AllianceGenome:WB:WBGene00011289
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Is expressed in neurons. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See R102.2 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
2
Sequence:
Chromosome: IV; NC_003282.8 (10687607..10688135)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene GLPGLI family protein Neighboring gene DUF4440 domain-containing protein Neighboring gene ncRNA Neighboring gene F-box domain-containing protein Neighboring gene TransThyretin-Related family domain Neighboring gene Aromatic amino acid beta-eliminating lyase/threonine aldolase domain-containing protein;Beta_elim_lyase domain-containing protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
  2. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
  3. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
DUF4440 domain-containing protein
NP_501975.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    10687607..10688135
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069574.7 → NP_501975.1  DUF4440 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_501975.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q21888
    Conserved Domains (1) summary
    pfam14534
    Location:7 → 112
    DUF4440; Domain of unknown function (DUF4440)
Nucleotide Protein
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