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zim-2 C2H2-type domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 177948, updated on 9-Dec-2024

Summary

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Official Symbol
zim-2
Official Full Name
C2H2-type domain-containing protein
Primary source
WormBase:WBGene00011600
Locus tag
CELE_T07G12.10
See related
AllianceGenome:WB:WBGene00011600
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in meiotic chromosome segregation. Located in condensed nuclear chromosome. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See zim-2 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
7
Sequence:
Chromosome: IV; NC_003282.8 (10555649..10558221)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene C2H2-type domain-containing protein Neighboring gene pseudo Neighboring gene pseudo Neighboring gene C2H2-type domain-containing protein Neighboring gene C2H2-type domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene conversion and positive selection driving the evolution of the Caenorhabditis ssp. ZIM/HIM-8 protein family. Liu Q. J Mol Evol, 2009 Mar. PMID 19221684
  2. Caenorhabditis elegans spermatocytes can segregate achiasmate homologous chromosomes apart at higher than random frequency during meiosis I. Gong T, et al. Genetics, 2023 Apr 6. PMID 36792551, Free PMC Article
  3. Identification of chromosome sequence motifs that mediate meiotic pairing and synapsis in C. elegans. Phillips CM, et al. Nat Cell Biol, 2009 Aug. PMID 19620970, Free PMC Article
  4. A family of zinc-finger proteins is required for chromosome-specific pairing and synapsis during meiosis in C. elegans. Phillips CM, et al. Dev Cell, 2006 Dec. PMID 17141157
  5. Finding the correct partner: the meiotic courtship. Naranjo T. Scientifica (Cairo), 2012. PMID 24278707, Free PMC Article

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in meiotic chromosome segregation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in condensed nuclear chromosome IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in condensed nuclear chromosome IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
C2H2-type domain-containing protein
NP_001370041.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    10555649..10558221
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001383192.2 → NP_001370041.1  C2H2-type domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    O18067
Nucleotide Protein
Heading Accession and Version

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