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dur-1 Dauer Up-Regulated [ Caenorhabditis elegans ]

Gene ID: 177846, updated on 18-Sep-2024

Summary

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Official Symbol
dur-1
Official Full Name
Dauer Up-Regulated
Primary source
WormBase:WBGene00001113
Locus tag
CELE_F25H8.5
See related
AllianceGenome:WB:WBGene00001113
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See dur-1 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
25
Sequence:
Chromosome: IV; NC_003282.8 (9921938..9928230, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Zinc finger BED domain-containing protein 3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA methyltransferase 10 homolog A Neighboring gene H/ACA ribonucleoprotein complex non-core subunit NAF1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Diverse Caenorhabditis elegans genes that are upregulated in dauer larvae also show elevated transcript levels in long-lived, aged, or starved adults. Cherkasova V, et al. J Mol Biol, 2000 Jul 14. PMID 10884342
  2. Molecular strategies of the Caenorhabditis elegans dauer larva to survive extreme desiccation. Erkut C, et al. PLoS One, 2013. PMID 24324795, Free PMC Article
  3. Functional proteomics reveals the biochemical niche of C. elegans DCR-1 in multiple small-RNA-mediated pathways. Duchaine TF, et al. Cell, 2006 Jan 27. PMID 16439208
  4. Conservation of caspase substrates across metazoans suggests hierarchical importance of signaling pathways over specific targets and cleavage site motifs in apoptosis. Crawford ED, et al. Cell Death Differ, 2012 Dec. PMID 22918439, Free PMC Article
  5. RNA targets and specificity of Staufen, a double-stranded RNA-binding protein in Caenorhabditis elegans. LeGendre JB, et al. J Biol Chem, 2013 Jan 25. PMID 23195953, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Dauer Up-Regulated
NP_001023145.1
  • Confirmed by transcript evidence
NP_001255433.1
  • Partially confirmed by transcript evidence
NP_001255434.1
  • Partially confirmed by transcript evidence
NP_001255435.1
  • Partially confirmed by transcript evidence
NP_001255436.1
  • Partially confirmed by transcript evidence
NP_001255438.1
  • Confirmed by transcript evidence
NP_001255439.1
  • Confirmed by transcript evidence
NP_001255440.1
  • Confirmed by transcript evidence
NP_001255443.1
  • Confirmed by transcript evidence
NP_001255446.1
  • Partially confirmed by transcript evidence
NP_001293942.1
  • Partially confirmed by transcript evidence
NP_001360167.1
  • Confirmed by transcript evidence
NP_001368122.1
  • Confirmed by transcript evidence
NP_001370882.1
  • Confirmed by transcript evidence
NP_001370883.1
  • Confirmed by transcript evidence
NP_001380114.1
  • Confirmed by transcript evidence
NP_501786.2
  • Partially confirmed by transcript evidence
NP_501787.3
  • Partially confirmed by transcript evidence
NP_501788.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    9921938..9928230 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001383173.1 → NP_001370882.1  Dauer Up-Regulated [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    H9G2U1

  2. NM_001372910.1 → NP_001360167.1  Dauer Up-Regulated [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    H9G2U5

  3. NM_001027974.4 → NP_001023145.1  Dauer Up-Regulated [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001023145.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7JLY3
    Conserved Domains (1) summary
    TIGR00927
    Location:27 → 259
    2A1904; K+-dependent Na+/Ca+ exchanger

  4. NM_069385.6 → NP_501786.2  Dauer Up-Regulated [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_501786.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q19790
    Conserved Domains (2) summary
    cl01503
    Location:494 → 640
    TrbL; TrbL/VirB6 plasmid conjugal transfer protein
    cl21509
    Location:301 → 416
    ApoLp-III_like; Apolipophorin-III and similar insect proteins

  5. NM_001268504.3 → NP_001255433.1  Dauer Up-Regulated [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255433.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H9G2T7
    Conserved Domains (1) summary
    cl21509
    Location:40 → 156
    ApoLp-III_like; Apolipophorin-III and similar insect proteins

  6. NM_001268505.3 → NP_001255434.1  Dauer Up-Regulated [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255434.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H9G2T6
    Conserved Domains (1) summary
    cl21509
    Location:63 → 178
    ApoLp-III_like; Apolipophorin-III and similar insect proteins

  7. NM_069386.8 → NP_501787.3  Dauer Up-Regulated [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_501787.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95ZV0
    Conserved Domains (2) summary
    cl01503
    Location:512 → 658
    TrbL; TrbL/VirB6 plasmid conjugal transfer protein
    cl21509
    Location:295 → 436
    ApoLp-III_like; Apolipophorin-III and similar insect proteins

  8. NM_001268506.3 → NP_001255435.1  Dauer Up-Regulated [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255435.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H9G2U6
    Conserved Domains (1) summary
    cl21509
    Location:47 → 179
    ApoLp-III_like; Apolipophorin-III and similar insect proteins

  9. NM_001268507.3 → NP_001255436.1  Dauer Up-Regulated [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255436.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H9G2U2
    Conserved Domains (3) summary
    COG0840
    Location:321 → 596
    Tar; Methyl-accepting chemotaxis protein [Cell motility, Signal transduction mechanisms]
    cl01503
    Location:535 → 681
    TrbL; TrbL/VirB6 plasmid conjugal transfer protein
    cl21509
    Location:318 → 459
    ApoLp-III_like; Apolipophorin-III and similar insect proteins

  10. NM_001307013.3 → NP_001293942.1  Dauer Up-Regulated [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293942.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A061ACN9

  11. NM_001268509.3 → NP_001255438.1  Dauer Up-Regulated [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255438.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H9G2T9

  12. NM_001268510.3 → NP_001255439.1  Dauer Up-Regulated [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255439.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D3YT33

  13. NM_001268511.3 → NP_001255440.1  Dauer Up-Regulated [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255440.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H9G2U3

  14. NM_001392376.1 → NP_001380114.1  Dauer Up-Regulated [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    H9G2T8

  15. NM_001268514.3 → NP_001255443.1  Dauer Up-Regulated [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255443.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D3YT34

  16. NM_001383175.1 → NP_001370883.1  Dauer Up-Regulated [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    H9G2U7

  17. NM_001380423.1 → NP_001368122.1  Dauer Up-Regulated [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    H9G2U0

  18. NM_069387.5 → NP_501788.2  Dauer Up-Regulated [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_501788.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7JLY2

  19. NM_001268517.5 → NP_001255446.1  Dauer Up-Regulated [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255446.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H9G2U4
Nucleotide Protein
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